Tomáš Konečný
PHD STUDENT / SCIENTIFIC ASSISTANT
Omics bioinformatics for health and systems biology
konecny@izbi.uni-leipzig.de
Room:
ACADEMIC CAREER
Experience- Bioinformatician, Armenian Bioinformatics Institute, since Jul 2022 - Present (10 months)
- Scientific Assistant in Bioinformatics, Interdisciplinary Centre for Bioinformatics, since Jul 2022 - Present (10 months)
- Research Assistant, Biologické centrum AV ČR, v.v.i., Jul 2022 - Dec 2022 (6 months)
- Doctoral Student, Biologické centrum AV ČR, v.v.i. Jan 2019 - Jun 2022 (3 years 6 months)
- Doctoral Student, ALGATECH Centre - Inst. Microbiol. Czech Acad. Sci., Oct 2017 - Dec 2018 (1 year 3 months)
- Research Scholar, CEITEC - Central European Institute of Technology, Mar 2013 - May 2017 (4 years 3 months):
- Bachelor's and Master's theses at Laboratory of Functional Genomics and Proteomics
- PhD Student in Bioinformatics, Interdisciplinary Centre for Bioinformatics, since Jul 2022 - Present (10 months)
- Doctor's Degree, Molecular and Cell Biology and Genetics, University of South Bohemia in České Budějovice, Oct 2017 - Jan 2023, Terminated on 27.1.2023
- Master's degree, Molecular Biology and Genetics, Masaryk University Brno, Sep 2015 - Sep 2017
- Bachelor's degree, Molecular Biology and Genetics, Masaryk University Brno, Sep 2012 - Aug 2015, Diplom
SCIENTIFIC INTERESTS
MAIN TOPICS
- Python (programming language)
- Shell scripting
- R (programming language)
- Bioinformatics
- DataAnalysis
- Data Visualization
- Machine learning
- Molecular Biology and Genetics
- Epigenetics
- Confocal Microscopy
PUBLICATIONS
https://orcid.org/0000-0003-2311-60922023 (2)
- T. Konecny, M. Nikoghosyan, H. Binder. Machine learning extracts marks of thiamine’s role in cold acclimation in the transcriptome of Vitis vinifera. . Front. Plant Sci. 2023. 14:
- Kristine Margaryan, Maria Nikogհosyan, Anush Baloyan, Hripsime Gasoyan, Emma Hovhannisyan, Levon Galstyan, Tomas Konecny, Arsen Arakelyan, Hans Binder. Machine learned -based visualization of the diversity of vine genomes worldwide and in Armenia using SOMmelier. BIO Web of Conferences. 2023. 68: 01009.